IL_1I97_032

3D structure

PDB id

1I97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH TETRACYCLINE

Experimental method

X-RAY DIFFRACTION

Resolution

4.5 Å

Loop

Sequence

GGG*CUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1I97_032 not in the Motif Atlas

Geometric match to IL_4KQ0_004

Geometric discrepancy: 0.2184

The information below is about IL_4KQ0_004

Detailed Annotation

Isolated cWH basepair

Broad Annotation

No text annotation

Motif group

IL_10167.5

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

55

Unit IDs

1I97|1|A|G|575
1I97|1|A|G|576
1I97|1|A|G|577
*
1I97|1|A|C|628
1I97|1|A|U|629
1I97|1|A|C|630

Current chains

Chain A

16S RRNA

Nearby chains

Chain H

30S RIBOSOMAL PROTEIN S8

Chain Q

30S RIBOSOMAL PROTEIN S17