IL_1I97_058

3D structure

PDB id

1I97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH TETRACYCLINE

Experimental method

X-RAY DIFFRACTION

Resolution

4.5 Å

Loop

Sequence

CUGCAU*AUGG

Length

10 nucleotides

Bulged bases

1I97|1|A|C|1036

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1I97_058 not in the Motif Atlas

Geometric match to IL_4V88_473

Geometric discrepancy: 0.3232

The information below is about IL_4V88_473

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_36174.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

15

Unit IDs

1I97|1|A|C|1033
1I97|1|A|U|1034
1I97|1|A|G|1035
1I97|1|A|C|1036
1I97|1|A|A|1037
1I97|1|A|U|1038
*
1I97|1|A|A|1185
1I97|1|A|U|1186
1I97|1|A|G|1187
1I97|1|A|G|1188

Current chains

Chain A

16S RRNA

Nearby chains

Chain C

30S RIBOSOMAL PROTEIN S3

Chain N

30S RIBOSOMAL PROTEIN S14