IL_1I97_071

3D structure

PDB id

1I97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH TETRACYCLINE

Experimental method

X-RAY DIFFRACTION

Resolution

4.5 Å

Loop

Sequence

GCCC*GUAAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1I97_071 not in the Motif Atlas

Geometric match to IL_7VYX_002

Geometric discrepancy: 0.3549

The information below is about IL_7VYX_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_85033.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

1I97|1|A|G|1383
1I97|1|A|C|1384
1I97|1|A|C|1385
1I97|1|A|C|1386
*
1I97|1|A|G|1474
1I97|1|A|U|1475
1I97|1|A|A|1476
1I97|1|A|A|1477
1I97|1|A|C|1478

Current chains

Chain A

16S RRNA

Nearby chains