IL_1I97_106
3D structure
- PDB id
- 1I97 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH TETRACYCLINE
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4.5 Å
Loop
- Sequence
- CCGUC*GUCUGG
- Length
- 11 nucleotides
- Bulged bases
- 1I97|1|A|U|1177
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1I97_106 not in the Motif Atlas
- Geometric match to IL_7VYX_004
- Geometric discrepancy: 0.3802
- The information below is about IL_7VYX_004
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_49751.4
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
1I97|1|A|C|1041
1I97|1|A|C|1042
1I97|1|A|G|1043
1I97|1|A|U|1044
1I97|1|A|C|1045
*
1I97|1|A|G|1174
1I97|1|A|U|1175
1I97|1|A|C|1176
1I97|1|A|U|1177
1I97|1|A|G|1178
1I97|1|A|G|1179
Current chains
- Chain A
- 16S RRNA
Nearby chains
- Chain C
- 30S RIBOSOMAL PROTEIN S3
- Chain E
- 30S RIBOSOMAL PROTEIN S5
- Chain J
- 30S RIBOSOMAL PROTEIN S10
- Chain N
- 30S RIBOSOMAL PROTEIN S14
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