IL_1J5A_036

3D structure

PDB id

1J5A (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURAL BASIS FOR THE INTERACTION OF ANTIBIOTICS WITH THE PEPTIDYL TRANSFERASE CENTER IN EUBACTERIA

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CGCUCAGUG*CUCAAGUG

Length

17 nucleotides

Bulged bases

1J5A|1|A|C|1152, 1J5A|1|A|A|1154

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1J5A|1|A|C|1027
1J5A|1|A|G|1028
1J5A|1|A|C|1029
1J5A|1|A|U|1030
1J5A|1|A|C|1031
1J5A|1|A|A|1032
1J5A|1|A|G|1033
1J5A|1|A|U|1034
1J5A|1|A|G|1035
*
1J5A|1|A|C|1150
1J5A|1|A|U|1151
1J5A|1|A|C|1152
1J5A|1|A|A|1153
1J5A|1|A|A|1154
1J5A|1|A|G|1155
1J5A|1|A|U|1156
1J5A|1|A|G|1157

Current chains

Chain A

23S RRNA

Nearby chains