IL_1J5A_075

3D structure

PDB id

1J5A (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURAL BASIS FOR THE INTERACTION OF ANTIBIOTICS WITH THE PEPTIDYL TRANSFERASE CENTER IN EUBACTERIA

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GCGAAAUUCCUUGUC*GACCUGCAC

Length

24 nucleotides

Bulged bases

1J5A|1|A|A|1921, 1J5A|1|A|U|1927, 1J5A|1|A|U|1946

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1J5A|1|A|G|1916
1J5A|1|A|C|1917
1J5A|1|A|G|1918
1J5A|1|A|A|1919
1J5A|1|A|A|1920
1J5A|1|A|A|1921
1J5A|1|A|U|1922
1J5A|1|A|U|1923
1J5A|1|A|C|1924
1J5A|1|A|C|1925
1J5A|1|A|U|1926
1J5A|1|A|U|1927
1J5A|1|A|G|1928
1J5A|1|A|U|1929
1J5A|1|A|C|1930
*
1J5A|1|A|G|1942
1J5A|1|A|A|1943
1J5A|1|A|C|1944
1J5A|1|A|C|1945
1J5A|1|A|U|1946
1J5A|1|A|G|1947
1J5A|1|A|C|1948
1J5A|1|A|A|1949
1J5A|1|A|C|1950

Current chains

Chain A

23S RRNA

Nearby chains