IL_1J5A_114

3D structure

PDB id

1J5A (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURAL BASIS FOR THE INTERACTION OF ANTIBIOTICS WITH THE PEPTIDYL TRANSFERASE CENTER IN EUBACTERIA

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

UCGCAUAGACAGCCA*UGGUCGAGUGA

Length

26 nucleotides

Bulged bases

1J5A|1|A|U|1056, 1J5A|1|A|A|1057

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1J5A|1|A|U|1051
1J5A|1|A|C|1052
1J5A|1|A|G|1053
1J5A|1|A|C|1054
1J5A|1|A|A|1055
1J5A|1|A|U|1056
1J5A|1|A|A|1057
1J5A|1|A|G|1058
1J5A|1|A|A|1059
1J5A|1|A|C|1060
1J5A|1|A|A|1061
1J5A|1|A|G|1062
1J5A|1|A|C|1063
1J5A|1|A|C|1064
1J5A|1|A|A|1065
*
1J5A|1|A|U|1116
1J5A|1|A|G|1117
1J5A|1|A|G|1118
1J5A|1|A|U|1119
1J5A|1|A|C|1120
1J5A|1|A|G|1121
1J5A|1|A|A|1122
1J5A|1|A|G|1123
1J5A|1|A|U|1124
1J5A|1|A|G|1125
1J5A|1|A|A|1126

Current chains

Chain A

23S RRNA

Nearby chains