IL_1JID_001

3D structure

PDB id

1JID (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human SRP19 in complex with helix 6 of Human SRP RNA

Experimental method

X-RAY DIFFRACTION

Resolution

1.8 Å

Loop

Sequence

G(5BU)G*CAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1JID_001 not in the Motif Atlas

Geometric match to IL_3LA5_001

Geometric discrepancy: 0.1129

The information below is about IL_3LA5_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

1JID|1|B|G|136
1JID|1|B|5BU|137
1JID|1|B|G|138
*
1JID|1|B|C|159
1JID|1|B|A|160
1JID|1|B|C|161

Current chains

Chain B

HELIX 6 OF HUMAN SRP RNA

Nearby chains