IL_1K01_013
3D structure
- PDB id
- 1K01 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural Basis for the Interaction of Antibiotics with the Peptidyl Transferase Center in Eubacteria
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- GAAC*GAGUGAAAGAGAAC
- Length
- 18 nucleotides
- Bulged bases
- 1K01|1|A|G|514
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1K01_013 not in the Motif Atlas
- Geometric match to IL_7A0S_009
- Geometric discrepancy: 0.2327
- The information below is about IL_7A0S_009
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_44923.2
- Basepair signature
- cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L
- Number of instances in this motif group
- 10
Unit IDs
1K01|1|A|G|492
1K01|1|A|A|493
1K01|1|A|A|494
1K01|1|A|C|495
*
1K01|1|A|G|506
1K01|1|A|A|507
1K01|1|A|G|508
1K01|1|A|U|509
1K01|1|A|G|510
1K01|1|A|A|511
1K01|1|A|A|512
1K01|1|A|A|513
1K01|1|A|G|514
1K01|1|A|A|515
1K01|1|A|G|516
1K01|1|A|A|517
1K01|1|A|A|518
1K01|1|A|C|519
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain L
- Ribosomal Protein L22
Coloring options: