IL_1K73_043

3D structure

PDB id

1K73 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Co-crystal Structure of Anisomycin Bound to the 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

3.01 Å

Loop

Sequence

CCUAGACAG*CCGAG

Length

14 nucleotides

Bulged bases

1K73|1|A|A|1150

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1K73_043 not in the Motif Atlas

Homologous match to IL_4V9F_042

Geometric discrepancy: 0.0385

The information below is about IL_4V9F_042

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_99692.3

Basepair signature

cWW-tSS-tSH-L-R-R-L-cWW-L-L

Number of instances in this motif group

6

Unit IDs

1K73|1|A|C|1147
1K73|1|A|C|1148
1K73|1|A|U|1149
1K73|1|A|A|1150
1K73|1|A|G|1151
1K73|1|A|A|1152
1K73|1|A|C|1153
1K73|1|A|A|1154
1K73|1|A|G|1155
*
1K73|1|A|C|1212
1K73|1|A|C|1213
1K73|1|A|G|1214
1K73|1|A|A|1215
1K73|1|A|G|1216

Current chains

Chain A

23S RRNA

Nearby chains

Chain G

RIBOSOMAL PROTEIN L6

Chain I

RIBOSOMAL PROTEIN L10