3D structure

PDB id
1K73 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Co-crystal Structure of Anisomycin Bound to the 50S Ribosomal Subunit
Experimental method
X-RAY DIFFRACTION
Resolution
3.01 Å

Loop

Sequence
CGUACC*GAAGAAG
Length
13 nucleotides
Bulged bases
1K73|1|A|G|1777
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_1K73_063 not in the Motif Atlas
Homologous match to IL_4V9F_063
Geometric discrepancy: 0.0292
The information below is about IL_4V9F_063
Detailed Annotation
tSH-tSH-tHH-tHS
Broad Annotation
No text annotation
Motif group
IL_20700.1
Basepair signature
cWW-tSH-L-R-tHH-tHS-cWW
Number of instances in this motif group
10

Unit IDs

1K73|1|A|C|1764
1K73|1|A|G|1765
1K73|1|A|U|1766
1K73|1|A|A|1767
1K73|1|A|C|1768
1K73|1|A|C|1769
*
1K73|1|A|G|1774
1K73|1|A|A|1775
1K73|1|A|A|1776
1K73|1|A|G|1777
1K73|1|A|A|1778
1K73|1|A|A|1779
1K73|1|A|G|1780

Current chains

Chain A
23S RRNA

Nearby chains

Chain 1
RIBOSOMAL PROTEIN L37Ae
Chain Q
RIBOSOMAL PROTEIN L19E

Coloring options:


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