IL_1K73_071

3D structure

PDB id

1K73 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Co-crystal Structure of Anisomycin Bound to the 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

3.01 Å

Loop

Sequence

CGUAGUACCUUG*CUUG

Length

16 nucleotides

Bulged bases

1K73|1|A|G|1979, 1K73|1|A|U|1985, 1K73|1|A|U|2004

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1K73_071 not in the Motif Atlas

Geometric match to IL_4V9F_071

Geometric discrepancy: 0.0285

The information below is about IL_4V9F_071

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_04332.3

Basepair signature

cWW-L-R-L-cWW-L-L-R-L-R-L

Number of instances in this motif group

2

Unit IDs

1K73|1|A|C|1975
1K73|1|A|G|1976
1K73|1|A|U|1977
1K73|1|A|A|1978
1K73|1|A|G|1979
1K73|1|A|U|1980
1K73|1|A|A|1981
1K73|1|A|C|1982
1K73|1|A|C|1983
1K73|1|A|U|1984
1K73|1|A|U|1985
1K73|1|A|G|1986
*
1K73|1|A|C|2002
1K73|1|A|U|2003
1K73|1|A|U|2004
1K73|1|A|G|2005

Current chains

Chain A

23S RRNA

Nearby chains