IL_1K73_075

3D structure

PDB id

1K73 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Co-crystal Structure of Anisomycin Bound to the 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

3.01 Å

Loop

Sequence

GA*UACC

Length

6 nucleotides

Bulged bases

1K73|1|A|A|2474

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1K73_075 not in the Motif Atlas

Homologous match to IL_4V9F_075

Geometric discrepancy: 0.0361

The information below is about IL_4V9F_075

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_34520.3

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

61

Unit IDs

1K73|1|A|G|2111
1K73|1|A|A|2112
*
1K73|1|A|U|2473
1K73|1|A|A|2474
1K73|1|A|C|2475
1K73|1|A|C|2476

Current chains

Chain A

23S RRNA

Nearby chains

Chain C

RIBOSOMAL PROTEIN L2