IL_1KUQ_003

3D structure

PDB id

1KUQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF T3C MUTANT S15 RIBOSOMAL PROTEIN IN COMPLEX WITH 16S RRNA

Experimental method

X-RAY DIFFRACTION

Resolution

2.84 Å

Loop

Sequence

GAGAG*UGGU

Length

9 nucleotides

Bulged bases

1KUQ|1|B|A|29||A

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_68538.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

8

Unit IDs

1KUQ|1|B|G|26
1KUQ|1|B|A|27||A
1KUQ|1|B|G|28||A
1KUQ|1|B|A|29||A
1KUQ|1|B|G|30
*
1KUQ|1|B|U|39
1KUQ|1|B|G|40
1KUQ|1|B|G|41
1KUQ|1|B|U|42

Current chains

Chain B

16S RIBOSOMAL RNA FRAGMENT

Nearby chains

Chain A

30S RIBOSOMAL PROTEIN S15