IL_1L9A_002

3D structure

PDB id

1L9A (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF SRP19 IN COMPLEX WITH THE S DOMAIN OF SIGNAL RECOGNITION PARTICLE RNA

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GUUC*GAUC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_30621.4

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

66

Unit IDs

1L9A|1|B|G|120
1L9A|1|B|U|121
1L9A|1|B|U|122
1L9A|1|B|C|123
*
1L9A|1|B|G|227
1L9A|1|B|A|228
1L9A|1|B|U|229
1L9A|1|B|C|230

Current chains

Chain B

signal recognition particle RNA S domain

Nearby chains