IL_1L9A_006

3D structure

PDB id

1L9A (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF SRP19 IN COMPLEX WITH THE S DOMAIN OF SIGNAL RECOGNITION PARTICLE RNA

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UGAACCG*CAAAA

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_31084.1

Basepair signature

cWW-L-R-L-R-L-R-L-cWW-L

Number of instances in this motif group

1

Unit IDs

1L9A|1|B|U|181
1L9A|1|B|G|182
1L9A|1|B|A|183
1L9A|1|B|A|184
1L9A|1|B|C|185
1L9A|1|B|C|186
1L9A|1|B|G|187
*
1L9A|1|B|C|212
1L9A|1|B|A|213
1L9A|1|B|A|214
1L9A|1|B|A|215
1L9A|1|B|A|216

Current chains

Chain B

signal recognition particle RNA S domain

Nearby chains