IL_1L9A_008

3D structure

PDB id

1L9A (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF SRP19 IN COMPLEX WITH THE S DOMAIN OF SIGNAL RECOGNITION PARTICLE RNA

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CCAGGU*GAGCAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

tSH-tHW-tHS-cWW

Broad Annotation

No text annotation

Motif group

IL_71294.3

Basepair signature

cWW-L-R-L-R-L-R-L-R-cWW

Number of instances in this motif group

2

Unit IDs

1L9A|1|B|C|190
1L9A|1|B|C|191
1L9A|1|B|A|192
1L9A|1|B|G|193
1L9A|1|B|G|194
1L9A|1|B|U|195
*
1L9A|1|B|G|204
1L9A|1|B|A|205
1L9A|1|B|G|206
1L9A|1|B|C|207
1L9A|1|B|A|208
1L9A|1|B|G|209

Current chains

Chain B

signal recognition particle RNA S domain

Nearby chains

Chain A

SIGNAL RECOGNITION PARTICLE 19 KDA PROTEIN