3D structure

PDB id
1LNG (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of the SRP19-7S.S SRP RNA Complex of M. jannaschii
Experimental method
X-RAY DIFFRACTION
Resolution
2.3 Å

Loop

Sequence
GCCAGGC*GAGCAAC
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_19589.1
Basepair signature
cWW-cSW-tSH-tWH-tHW-tHS-cWW-cWW
Number of instances in this motif group
2

Unit IDs

1LNG|1|B|G|200
1LNG|1|B|C|201
1LNG|1|B|C|202
1LNG|1|B|A|203
1LNG|1|B|G|204
1LNG|1|B|G|205
1LNG|1|B|C|206
*
1LNG|1|B|G|215
1LNG|1|B|A|216
1LNG|1|B|G|217
1LNG|1|B|C|218
1LNG|1|B|A|219
1LNG|1|B|A|220
1LNG|1|B|C|221

Current chains

Chain B
7S.S SRP RNA

Nearby chains

Chain A
Signal recognition particle 19 kDa protein

Coloring options:

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