IL_1M90_004
3D structure
- PDB id
- 1M90 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Co-crystal structure of CCA-Phe-caproic acid-biotin and sparsomycin bound to the 50S ribosomal subunit
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- GGGAG*CGAAGAAC
- Length
- 13 nucleotides
- Bulged bases
- 1M90|1|A|A|96
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1M90_004 not in the Motif Atlas
- Homologous match to IL_4V9F_004
- Geometric discrepancy: 0.0322
- The information below is about IL_4V9F_004
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_01488.3
- Basepair signature
- cWW-tSS-tSH-L-R-tHS-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
1M90|1|A|G|77
1M90|1|A|G|78
1M90|1|A|G|79
1M90|1|A|A|80
1M90|1|A|G|81
*
1M90|1|A|C|93
1M90|1|A|G|94
1M90|1|A|A|95
1M90|1|A|A|96
1M90|1|A|G|97
1M90|1|A|A|98
1M90|1|A|A|99
1M90|1|A|C|100
Current chains
- Chain A
- 23S RRNA
Nearby chains
- Chain U
- RIBOSOMAL PROTEIN L24
- Chain W
- RIBOSOMAL PROTEIN L29
Coloring options: