IL_1MFQ_006

3D structure

PDB id

1MFQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure Analysis of a Ternary S-Domain Complex of Human Signal Recognition Particle

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UGAACCG*CAAAA

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_85652.1

Basepair signature

cWW-tSH-L-R-L-R-L-cWW-L

Number of instances in this motif group

1

Unit IDs

1MFQ|1|A|U|181
1MFQ|1|A|G|182
1MFQ|1|A|A|183
1MFQ|1|A|A|184
1MFQ|1|A|C|185
1MFQ|1|A|C|186
1MFQ|1|A|G|187
*
1MFQ|1|A|C|212
1MFQ|1|A|A|213
1MFQ|1|A|A|214
1MFQ|1|A|A|215
1MFQ|1|A|A|216

Current chains

Chain A

7S RNA of human SRP

Nearby chains

Chain C

signal recognition particle 54kDa protein