1MFQ Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_1MFQ_001 | 1/A/146:151 | GNRA variation HL_34789.3 | ||
| HL_1MFQ_002 | 1/A/197:202 | GNRA HL_34789.3 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_1MFQ_001 | 1/A/117:120, 1/A/230:234 | No text annotation IL_05553.1 | ||
| IL_1MFQ_002 | 1/A/120:122, 1/A/228:230 | Isolated non-canonical cWW pair IL_71625.2 | ||
| IL_1MFQ_003 | 1/A/132:134, 1/A/163:165 | Isolated non-canonical cWW pair IL_01003.3 | ||
| IL_1MFQ_004 | 1/A/138:141, 1/A/156:159 | Tandem non-canonical cWW pairs IL_15225.2 | ||
| IL_1MFQ_005 | 1/A/175:177, 1/A/220:221 | Single bulged A IL_14190.2 | ||
| IL_1MFQ_006 | 1/A/181:187, 1/A/212:216 | No text annotation IL_85652.1 | ||
| IL_1MFQ_007 | 1/A/190:195, 1/A/204:209 | tSH-tHW-tHS-cWW IL_35186.2 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_1MFQ_002 | 1/A/128:129, 1/A/168:175, 1/A/221:222 | No text annotation J3_36023.1 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| J3_1MFQ_001 | No text annotation |
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