IL_1MZP_003
3D structure
- PDB id
- 1MZP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the L1 protuberance in the ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.65 Å
Loop
- Sequence
- GGAG*CGCCGGUGAAAUAC
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_75283.2
- Basepair signature
- cWW-tSS-L-R-L-tHS-L-cWW-L-tWH-tWH-L-L-R
- Number of instances in this motif group
- 3
Unit IDs
1MZP|1|B|G|20
1MZP|1|B|G|21
1MZP|1|B|A|22
1MZP|1|B|G|23
*
1MZP|1|B|C|32
1MZP|1|B|G|33
1MZP|1|B|C|34
1MZP|1|B|C|35
1MZP|1|B|G|36
1MZP|1|B|G|37
1MZP|1|B|U|38
1MZP|1|B|G|39
1MZP|1|B|A|40
1MZP|1|B|A|41
1MZP|1|B|A|42
1MZP|1|B|U|43
1MZP|1|B|A|44
1MZP|1|B|C|45
Current chains
- Chain B
- fragment of 23S rRNA
Nearby chains
- Chain A
- 50s ribosomal protein L1P
Coloring options: