#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 7 8 9 10 11 12 13 14break 15 16 17 181-131-182-176-127-1113-1613-1814-15
1 IL_1MZP_0031MZP0.18270Bfragment of 23S rRNAC32G33C34C35G36G37U38G39A40A41A42U43A44C45*G20G21A22G23cWWntsSntWHtWHtHSntSscWW
2 IL_3U4M_0033U4M0.00000B LSU rRNAC2161G2162C2163C2164G2165G2166U2167G2168A2169A2170A2171U2172A2173C2174*G2124G2125A2126G2127ncsScWWntsStWHtWHtHStSscWW
3 IL_5ML7_0075ML70.41360B23S ribosomal RNAC2206A2207A2208C2209A2210G2211U2212G2213A2214A2215A2216U2217A2218C2219*G2165G2166A2167G2168cWWntWHtWHtHScWW

3D structures

Complete motif including flanking bases
SequenceCounts
CGCCGGUGAAAUAC*GGAG2
CAACAGUGAAAUAC*GGAG1
Non-Watson-Crick part of the motif
SequenceCounts
GCCGGUGAAAUA*GA2
AACAGUGAAAUA*GA1

Release history

Release3.773.783.793.803.813.823.833.843.853.863.873.883.893.90
Date2023-12-062024-01-032024-01-032024-01-312024-02-282024-03-272024-04-242024-05-222024-06-192024-07-172024-08-142024-09-112024-10-092024-11-06
StatusUpdated, 2 parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (3)
  • Basepair signature
    cWW-tSS-L-R-L-tHS-L-cWW-L-tWH-tWH-L-L-R
    Heat map statistics
    Min 0.18 | Avg 0.23 | Max 0.42
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