Motif IL_75283.2 Version IL_75283.2 of this group appears in releases 3.77 to 3.99
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | break | 15 | 16 | 17 | 18 | 1-13 | 1-18 | 2-17 | 6-12 | 7-11 | 13-16 | 13-18 | 14-15 | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1MZP_003 | 1MZP | 0.1827 | 0 | B | C | 32 | G | 33 | C | 34 | C | 35 | G | 36 | G | 37 | U | 38 | G | 39 | A | 40 | A | 41 | A | 42 | U | 43 | A | 44 | C | 45 | * | G | 20 | G | 21 | A | 22 | G | 23 | cWW | ntsS | ntWH | tWH | tHS | ntSs | cWW | |
| 2 | IL_3U4M_003 | 3U4M | 0.0000 | 0 | B | C | 2161 | G | 2162 | C | 2163 | C | 2164 | G | 2165 | G | 2166 | U | 2167 | G | 2168 | A | 2169 | A | 2170 | A | 2171 | U | 2172 | A | 2173 | C | 2174 | * | G | 2124 | G | 2125 | A | 2126 | G | 2127 | ncsS | cWW | ntsS | tWH | tWH | tHS | tSs | cWW |
| 3 | IL_5ML7_007 | 5ML7 | 0.4136 | 0 | B | C | 2206 | A | 2207 | A | 2208 | C | 2209 | A | 2210 | G | 2211 | U | 2212 | G | 2213 | A | 2214 | A | 2215 | A | 2216 | U | 2217 | A | 2218 | C | 2219 | * | G | 2165 | G | 2166 | A | 2167 | G | 2168 | cWW | ntWH | tWH | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGCCGGUGAAAUAC*GGAG | 2 |
| CAACAGUGAAAUAC*GGAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GCCGGUGAAAUA*GA | 2 |
| AACAGUGAAAUA*GA | 1 |
Release history
| Release | 3.77 | 3.78 | 3.79 | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 | 3.88 | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 | 3.98 | 3.99 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2023-12-06 | 2024-01-03 | 2024-01-03 | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 | 2024-09-11 | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 | 2025-06-18 | 2025-07-16 |
| Status | Updated, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-tSS-L-R-L-tHS-L-cWW-L-tWH-tWH-L-L-R
- Heat map statistics
- Min 0.18 | Avg 0.23 | Max 0.42
Coloring options: