IL_1N36_069

3D structure

PDB id

1N36 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus 30S ribosomal subunit in the presence of crystallographically disordered codon and near-cognate transfer RNA anticodon stem-loop mismatched at the second codon position

Experimental method

X-RAY DIFFRACTION

Resolution

3.65 Å

Loop

Sequence

GGGGACAAC*GCUAAUCCCC

Length

19 nucleotides

Bulged bases

1N36|1|A|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1N36|1|A|G|145
1N36|1|A|G|146
1N36|1|A|G|147
1N36|1|A|G|148
1N36|1|A|A|149
1N36|1|A|C|150
1N36|1|A|A|151
1N36|1|A|A|152
1N36|1|A|C|153
*
1N36|1|A|G|168
1N36|1|A|C|169
1N36|1|A|U|170
1N36|1|A|A|171
1N36|1|A|A|172
1N36|1|A|U|173
1N36|1|A|C|174
1N36|1|A|C|175
1N36|1|A|C|176
1N36|1|A|C|177

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain T

30S RIBOSOMAL PROTEIN S20