IL_1N36_071

3D structure

PDB id

1N36 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus 30S ribosomal subunit in the presence of crystallographically disordered codon and near-cognate transfer RNA anticodon stem-loop mismatched at the second codon position

Experimental method

X-RAY DIFFRACTION

Resolution

3.65 Å

Loop

Sequence

CGGGACGAAACC*GACUGACGGUACCG

Length

26 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1N36|1|A|C|444
1N36|1|A|G|445
1N36|1|A|G|446
1N36|1|A|G|447
1N36|1|A|A|448
1N36|1|A|C|449
1N36|1|A|G|450
1N36|1|A|A|451
1N36|1|A|A|452
1N36|1|A|A|453
1N36|1|A|C|454
1N36|1|A|C|455
*
1N36|1|A|G|477
1N36|1|A|A|478
1N36|1|A|C|479
1N36|1|A|U|480
1N36|1|A|G|481
1N36|1|A|A|482
1N36|1|A|C|483
1N36|1|A|G|484
1N36|1|A|G|485
1N36|1|A|U|486
1N36|1|A|A|487
1N36|1|A|C|488
1N36|1|A|C|489
1N36|1|A|G|490

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain D

30S RIBOSOMAL PROTEIN S4

Chain P

30S RIBOSOMAL PROTEIN S16