IL_1N36_079
3D structure
- PDB id
- 1N36 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Thermus thermophilus 30S ribosomal subunit in the presence of crystallographically disordered codon and near-cognate transfer RNA anticodon stem-loop mismatched at the second codon position
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.65 Å
Loop
- Sequence
- CGAUGCCAC*GGAGCUAAUCG
- Length
- 20 nucleotides
- Bulged bases
- 1N36|1|A|U|1257, 1N36|1|A|U|1278, 1N36|1|A|A|1280, 1N36|1|A|U|1281
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
1N36|1|A|C|1254
1N36|1|A|G|1255
1N36|1|A|A|1256
1N36|1|A|U|1257
1N36|1|A|G|1258
1N36|1|A|C|1259
1N36|1|A|C|1260
1N36|1|A|A|1261
1N36|1|A|C|1262
*
1N36|1|A|G|1273
1N36|1|A|G|1274
1N36|1|A|A|1275
1N36|1|A|G|1276
1N36|1|A|C|1277
1N36|1|A|U|1278
1N36|1|A|A|1279
1N36|1|A|A|1280
1N36|1|A|U|1281
1N36|1|A|C|1282
1N36|1|A|G|1283
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain C
- 30S RIBOSOMAL PROTEIN S3
- Chain J
- 30S RIBOSOMAL PROTEIN S10
- Chain N
- 30S RIBOSOMAL PROTEIN S14
- Chain V
- 30S RIBOSOMAL PROTEIN THX
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