IL_1NBS_007

3D structure

PDB id

1NBS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the specificity domain of Ribonuclease P RNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

AAAAAA*UGAGUAU

Length

13 nucleotides

Bulged bases (A, C, G, U)

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

7x6 Sarcin-Ricin; G-bulge

Broad Annotation

Sarcin-Ricin; G-bulge

Motif group

IL_76042.3

Basepair signature

cWW-tSH-tHH-cSH-tWH-tHS-cWW

Number of instances in this motif group

9

Unit IDs

1NBS|1|B|A|138
1NBS|1|B|A|139
1NBS|1|B|A|140
1NBS|1|B|A|141
1NBS|1|B|A|142
1NBS|1|B|A|143
*
1NBS|1|B|U|165
1NBS|1|B|G|166
1NBS|1|B|A|167
1NBS|1|B|G|168
1NBS|1|B|U|169
1NBS|1|B|A|170
1NBS|1|B|U|171

Current chains

Chain B

RIBONUCLEASE P RNA

Nearby chains