IL_1NBS_009

3D structure

PDB id

1NBS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the specificity domain of Ribonuclease P RNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

UG*UAAA

Length

6 nucleotides

Bulged bases

1NBS|1|B|A|229, 1NBS|1|B|A|230

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Major groove intercalation

Broad Annotation

Major groove intercalation

Motif group

IL_82107.2

Basepair signature

cWW-cWW

Number of instances in this motif group

34

Unit IDs

1NBS|1|B|U|181
1NBS|1|B|G|182
*
1NBS|1|B|U|228
1NBS|1|B|A|229
1NBS|1|B|A|230
1NBS|1|B|A|231

Current chains

Chain B

RIBONUCLEASE P RNA

Nearby chains

Chain A

Ribonuclease P class B; RNase P class B