IL_1NKW_034
3D structure
- PDB id
- 1NKW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GAG*CUCC
- Length
- 7 nucleotides
- Bulged bases
- 1NKW|1|0|C|926
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1NKW_034 not in the Motif Atlas
- Geometric match to IL_4PKD_001
- Geometric discrepancy: 0.2609
- The information below is about IL_4PKD_001
- Detailed Annotation
- Isolated non-canonical cWW with bulges
- Broad Annotation
- Isolated non-canonical cWW with bulges
- Motif group
- IL_07785.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 33
Unit IDs
1NKW|1|0|G|875
1NKW|1|0|A|876
1NKW|1|0|G|877
*
1NKW|1|0|C|924
1NKW|1|0|U|925
1NKW|1|0|C|926
1NKW|1|0|C|927
Current chains
- Chain 0
- 23S ribosomal RNA
Nearby chains
- Chain 9
- 5S ribosomal RNA; 5S rRNA
- Chain K
- 50S ribosomal protein L16
- Chain U
- 50S ribosomal protein L27
Coloring options: