IL_1NKW_097

3D structure

PDB id

1NKW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GCGUAG*CC

Length

8 nucleotides

Bulged bases

1NKW|1|0|G|2095, 1NKW|1|0|U|2096, 1NKW|1|0|A|2097

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1NKW_097 not in the Motif Atlas

Geometric match to IL_8C3A_128

Geometric discrepancy: 0.3034

The information below is about IL_8C3A_128

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_24807.2

Basepair signature

cWW-cWW

Number of instances in this motif group

16

Unit IDs

1NKW|1|0|G|2093
1NKW|1|0|C|2094
1NKW|1|0|G|2095
1NKW|1|0|U|2096
1NKW|1|0|A|2097
1NKW|1|0|G|2103
*
1NKW|1|0|C|2161
1NKW|1|0|C|2162

Current chains

Chain 0

23S ribosomal RNA

Nearby chains