IL_1NKW_117

3D structure

PDB id

1NKW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

AUUGAG*CAAGAUGAGU

Length

16 nucleotides

Bulged bases

1NKW|1|0|G|2757, 1NKW|1|0|G|2760

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1NKW|1|0|A|2614
1NKW|1|0|U|2615
1NKW|1|0|U|2616
1NKW|1|0|G|2617
1NKW|1|0|A|2618
1NKW|1|0|G|2619
*
1NKW|1|0|C|2754
1NKW|1|0|A|2755
1NKW|1|0|A|2756
1NKW|1|0|G|2757
1NKW|1|0|A|2758
1NKW|1|0|U|2759
1NKW|1|0|G|2760
1NKW|1|0|A|2761
1NKW|1|0|G|2762
1NKW|1|0|U|2763

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain B

50S ribosomal protein L3

Chain H

50S ribosomal protein L13