IL_1NKW_149

3D structure

PDB id

1NKW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GCGAAAUUCCUUGU*ACCUGCAC

Length

22 nucleotides

Bulged bases

1NKW|1|0|A|1920, 1NKW|1|0|A|1921, 1NKW|1|0|U|1922, 1NKW|1|0|U|1927, 1NKW|1|0|U|1946

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1NKW|1|0|G|1916
1NKW|1|0|C|1917
1NKW|1|0|G|1918
1NKW|1|0|A|1919
1NKW|1|0|A|1920
1NKW|1|0|A|1921
1NKW|1|0|U|1922
1NKW|1|0|U|1923
1NKW|1|0|C|1924
1NKW|1|0|C|1925
1NKW|1|0|U|1926
1NKW|1|0|U|1927
1NKW|1|0|G|1928
1NKW|1|0|U|1929
*
1NKW|1|0|A|1943
1NKW|1|0|C|1944
1NKW|1|0|C|1945
1NKW|1|0|U|1946
1NKW|1|0|G|1947
1NKW|1|0|C|1948
1NKW|1|0|A|1949
1NKW|1|0|C|1950

Current chains

Chain 0

23S ribosomal RNA

Nearby chains