IL_1NKW_165

3D structure

PDB id

1NKW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGGACG*CCAAGAAAAGC

Length

17 nucleotides

Bulged bases

1NKW|1|0|A|1441, 1NKW|1|0|C|1442, 1NKW|1|0|A|1582, 1NKW|1|0|A|1583

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1NKW|1|0|G|1438
1NKW|1|0|G|1439
1NKW|1|0|G|1440
1NKW|1|0|A|1441
1NKW|1|0|C|1442
1NKW|1|0|G|1443
*
1NKW|1|0|C|1580
1NKW|1|0|C|1581
1NKW|1|0|A|1582
1NKW|1|0|A|1583
1NKW|1|0|G|1584
1NKW|1|0|A|1585
1NKW|1|0|A|1586
1NKW|1|0|A|1587
1NKW|1|0|A|1588
1NKW|1|0|G|1589
1NKW|1|0|C|1590

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain A

50S ribosomal protein L2