IL_1NWY_030
3D structure
- PDB id
- 1NWY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCIN
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CUGUAG*CGAAGG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1NWY_030 not in the Motif Atlas
- Homologous match to IL_7A0S_027
- Geometric discrepancy: 0.4815
- The information below is about IL_7A0S_027
- Detailed Annotation
- 5x5 Sarcin-Ricin with intercalated A; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_81631.1
- Basepair signature
- cWW-L-R-cSH-R-R-L-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
1NWY|1|0|C|870
1NWY|1|0|U|871
1NWY|1|0|G|872
1NWY|1|0|U|873
1NWY|1|0|A|874
1NWY|1|0|G|875
*
1NWY|1|0|C|927
1NWY|1|0|G|928
1NWY|1|0|A|929
1NWY|1|0|A|930
1NWY|1|0|G|931
1NWY|1|0|G|932
Current chains
- Chain 0
- 23S RIBOSOMAL RRNA
Nearby chains
- Chain 9
- 5S ribosomal RNA; 5S rRNA
- Chain K
- ribosomal protein L16
- Chain U
- ribosomal protein L27
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