IL_1NWY_058

3D structure

PDB id

1NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

UAC*GACG

Length

7 nucleotides

Bulged bases

1NWY|1|0|C|1575

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1NWY_058 not in the Motif Atlas

Homologous match to IL_7A0S_052

Geometric discrepancy: 0.2902

The information below is about IL_7A0S_052

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_38565.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

13

Unit IDs

1NWY|1|0|U|1447
1NWY|1|0|A|1448
1NWY|1|0|C|1449
*
1NWY|1|0|G|1573
1NWY|1|0|A|1574
1NWY|1|0|C|1575
1NWY|1|0|G|1576

Current chains

Chain 0

23S RIBOSOMAL RRNA

Nearby chains