IL_1NWY_062

3D structure

PDB id

1NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GCU*AC

Length

5 nucleotides

Bulged bases

1NWY|1|0|C|1489

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1NWY_062 not in the Motif Atlas

Homologous match to IL_7A0S_055

Geometric discrepancy: 0.5806

The information below is about IL_7A0S_055

Detailed Annotation

Single bulged C

Broad Annotation

No text annotation

Motif group

IL_05642.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

67

Unit IDs

1NWY|1|0|G|1488
1NWY|1|0|C|1489
1NWY|1|0|U|1490
*
1NWY|1|0|A|1534
1NWY|1|0|C|1535

Current chains

Chain 0

23S RIBOSOMAL RRNA

Nearby chains