IL_1NWY_115

3D structure

PDB id

1NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CU*ACAUG

Length

7 nucleotides

Bulged bases

1NWY|1|0|U|2693

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1NWY_115 not in the Motif Atlas

Homologous match to IL_7RQB_106

Geometric discrepancy: 0.1869

The information below is about IL_7RQB_106

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_71530.2

Basepair signature

cWW-cWW

Number of instances in this motif group

16

Unit IDs

1NWY|1|0|C|2674
1NWY|1|0|U|2675
*
1NWY|1|0|A|2690
1NWY|1|0|C|2691
1NWY|1|0|A|2692
1NWY|1|0|U|2693
1NWY|1|0|G|2694

Current chains

Chain 0

23S RIBOSOMAL RRNA

Nearby chains

Chain L

ribosomal protein L17