IL_1NWY_134

3D structure

PDB id

1NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

AGGGACG*CCAAGAAAAGCU

Length

19 nucleotides

Bulged bases

1NWY|1|0|A|1441, 1NWY|1|0|C|1442, 1NWY|1|0|A|1582, 1NWY|1|0|A|1583

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1NWY|1|0|A|1437
1NWY|1|0|G|1438
1NWY|1|0|G|1439
1NWY|1|0|G|1440
1NWY|1|0|A|1441
1NWY|1|0|C|1442
1NWY|1|0|G|1443
*
1NWY|1|0|C|1580
1NWY|1|0|C|1581
1NWY|1|0|A|1582
1NWY|1|0|A|1583
1NWY|1|0|G|1584
1NWY|1|0|A|1585
1NWY|1|0|A|1586
1NWY|1|0|A|1587
1NWY|1|0|A|1588
1NWY|1|0|G|1589
1NWY|1|0|C|1590
1NWY|1|0|U|1591

Current chains

Chain 0

23S RIBOSOMAL RRNA

Nearby chains

Chain A

ribosomal protein L2