IL_1NWY_138

3D structure

PDB id

1NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GCGAAAUUCCUUGU*ACCUGCAC

Length

22 nucleotides

Bulged bases

1NWY|1|0|A|1920, 1NWY|1|0|A|1921, 1NWY|1|0|U|1922, 1NWY|1|0|U|1927, 1NWY|1|0|U|1946

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1NWY|1|0|G|1916
1NWY|1|0|C|1917
1NWY|1|0|G|1918
1NWY|1|0|A|1919
1NWY|1|0|A|1920
1NWY|1|0|A|1921
1NWY|1|0|U|1922
1NWY|1|0|U|1923
1NWY|1|0|C|1924
1NWY|1|0|C|1925
1NWY|1|0|U|1926
1NWY|1|0|U|1927
1NWY|1|0|G|1928
1NWY|1|0|U|1929
*
1NWY|1|0|A|1943
1NWY|1|0|C|1944
1NWY|1|0|C|1945
1NWY|1|0|U|1946
1NWY|1|0|G|1947
1NWY|1|0|C|1948
1NWY|1|0|A|1949
1NWY|1|0|C|1950

Current chains

Chain 0

23S RIBOSOMAL RRNA

Nearby chains