IL_1NWY_160

3D structure

PDB id

1NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

UGCACG*UUCAG

Length

11 nucleotides

Bulged bases

1NWY|1|0|C|2824, 1NWY|1|0|C|2842

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1NWY_160 not in the Motif Atlas

Homologous match to IL_7A0S_101

Geometric discrepancy: 0.2688

The information below is about IL_7A0S_101

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_48489.2

Basepair signature

cWW-tSH-L-tHH-L-cWW

Number of instances in this motif group

9

Unit IDs

1NWY|1|0|U|2822
1NWY|1|0|G|2823
1NWY|1|0|C|2824
1NWY|1|0|A|2825
1NWY|1|0|C|2826
1NWY|1|0|G|2827
*
1NWY|1|0|U|2840
1NWY|1|0|U|2841
1NWY|1|0|C|2842
1NWY|1|0|A|2843
1NWY|1|0|G|2844

Current chains

Chain 0

23S RIBOSOMAL RRNA

Nearby chains

Chain L

ribosomal protein L17

Chain N

ribosomal protein L19