IL_1Q81_094
3D structure
- PDB id
- 1Q81 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of minihelix with 3' puromycin bound to A-site of the 50S ribosomal subunit.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.95 Å
Loop
- Sequence
- GGUAAG*CGAAAC
- Length
- 12 nucleotides
- Bulged bases
- 1Q81|1|A|A|2800
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1Q81_094 not in the Motif Atlas
- Geometric match to IL_5J7L_350
- Geometric discrepancy: 0.1656
- The information below is about IL_5J7L_350
- Detailed Annotation
- UAA/GAN with extra cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_49767.8
- Basepair signature
- cWW-cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
1Q81|1|A|G|2772
1Q81|1|A|G|2773
1Q81|1|A|U|2774
1Q81|1|A|A|2775
1Q81|1|A|A|2776
1Q81|1|A|G|2777
*
1Q81|1|A|C|2797
1Q81|1|A|G|2798
1Q81|1|A|A|2799
1Q81|1|A|A|2800
1Q81|1|A|A|2801
1Q81|1|A|C|2802
Current chains
- Chain A
- 23S ribosomal rna
Nearby chains
- Chain G
- 50S ribosomal protein L6P
- Chain K
- 50S ribosomal protein L13P
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