IL_1Q82_103
3D structure
- PDB id
- 1Q82 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of CC-Puromycin bound to the A-site of the 50S ribosomal subunit
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.98 Å
Loop
- Sequence
- GGAGUAC*GGAAAC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1Q82_103 not in the Motif Atlas
- Homologous match to IL_4V9F_106
- Geometric discrepancy: 0.0321
- The information below is about IL_4V9F_106
- Detailed Annotation
- 7x6 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_02666.2
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 18
Unit IDs
1Q82|1|B|G|3075
1Q82|1|B|G|3076
1Q82|1|B|A|3077
1Q82|1|B|G|3078
1Q82|1|B|U|3079
1Q82|1|B|A|3080
1Q82|1|B|C|3081
*
1Q82|1|B|G|3101
1Q82|1|B|G|3102
1Q82|1|B|A|3103
1Q82|1|B|A|3104
1Q82|1|B|A|3105
1Q82|1|B|C|3106
Current chains
- Chain B
- 5S ribosomal RNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain J
- L10 Ribosomal Protein
- Chain X
- 50S ribosomal protein L30P
Coloring options: