IL_1QA6_003

3D structure

PDB id

1QA6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNA COMPLEX

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GUAG*CAUC

Length

8 nucleotides

Bulged bases

1QA6|1|D|A|111

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_24856.1

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

8

Unit IDs

1QA6|1|D|G|109
1QA6|1|D|U|110
1QA6|1|D|A|111
1QA6|1|D|G|112
*
1QA6|1|D|C|126
1QA6|1|D|A|127
1QA6|1|D|U|128
1QA6|1|D|C|129

Current chains

Chain D

58 NUCLEOTIDE RIBOSOMAL RNA DOMAIN

Nearby chains

Chain A

RIBOSOMAL PROTEIN L11

Chain B

RIBOSOMAL PROTEIN L11

Chain C

58 NUCLEOTIDE RIBOSOMAL RNA DOMAIN