IL_1RLG_001
3D structure
- PDB id
- 1RLG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular basis of Box C/D RNA-protein interaction: co-crystal structure of the Archaeal sRNP intiation complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- C(5BU)C*GAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1RLG_001 not in the Motif Atlas
- Geometric match to IL_6F4H_001
- Geometric discrepancy: 0.1412
- The information below is about IL_6F4H_001
- Detailed Annotation
- Isolated cWH basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_70707.3
- Basepair signature
- cWW-cHW-cWW
- Number of instances in this motif group
- 70
Unit IDs
1RLG|1|C|C|2
1RLG|1|C|5BU|3
1RLG|1|C|C|4
*
1RLG|1|C|G|22
1RLG|1|C|A|23
1RLG|1|C|G|24
Current chains
- Chain C
- 25-MER
Nearby chains
- Chain A
- 50S ribosomal protein L7Ae
- Chain D
- 25-MER
Coloring options: