IL_1RY1_001

3D structure

PDB id

1RY1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the signal recognition particle interacting with the elongation-arrested ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

UAAG*CAGUA

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1RY1_001 not in the Motif Atlas

Homologous match to IL_1MFQ_001

Geometric discrepancy: 0.0003

The information below is about IL_1MFQ_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05553.1

Basepair signature

cWW-L-R-L-R-L-cWW

Number of instances in this motif group

3

Unit IDs

1RY1|1|A|U|117
1RY1|1|A|A|118
1RY1|1|A|A|119
1RY1|1|A|G|120
*
1RY1|1|A|C|230
1RY1|1|A|A|231
1RY1|1|A|G|232
1RY1|1|A|U|233
1RY1|1|A|A|234

Current chains

Chain A

SRP S domain

Nearby chains