IL_1S72_041

3D structure

PDB id

1S72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

UUAAGUG*CUCAAA

Length

13 nucleotides

Bulged bases

1S72|1|0|C|1245, 1S72|1|0|A|1247

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_04397.2

Basepair signature

cWW-tWH-L-tHW-cSH-cWW

Number of instances in this motif group

5

Unit IDs

1S72|1|0|U|1115
1S72|1|0|U|1116
1S72|1|0|A|1117
1S72|1|0|A|1118
1S72|1|0|G|1119
1S72|1|0|U|1120
1S72|1|0|G|1121
*
1S72|1|0|C|1243
1S72|1|0|U|1244
1S72|1|0|C|1245
1S72|1|0|A|1246
1S72|1|0|A|1247
1S72|1|0|A|1248

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain E

50S ribosomal protein L6P

Chain J

50S ribosomal protein L13P