IL_1S72_043

3D structure

PDB id

1S72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

CCUAGACAG*CCGAG

Length

14 nucleotides

Bulged bases

1S72|1|0|A|1150

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_34363.4

Basepair signature

cWW-cSS-tSS-L-tSH-tSS-L-R-bif-cWW

Number of instances in this motif group

6

Unit IDs

1S72|1|0|C|1147
1S72|1|0|C|1148
1S72|1|0|U|1149
1S72|1|0|A|1150
1S72|1|0|G|1151
1S72|1|0|A|1152
1S72|1|0|C|1153
1S72|1|0|A|1154
1S72|1|0|G|1155
*
1S72|1|0|C|1212
1S72|1|0|C|1213
1S72|1|0|G|1214
1S72|1|0|A|1215
1S72|1|0|G|1216

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain E

50S ribosomal protein L6P

Chain G

Acidic ribosomal protein P0 homolog