IL_1S72_052

3D structure

PDB id

1S72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

CUAAG*CGAAAUG

Length

12 nucleotides

Bulged bases

1S72|1|0|A|1486

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_93424.8

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

31

Unit IDs

1S72|1|0|C|1456
1S72|1|0|U|1457
1S72|1|0|A|1458
1S72|1|0|A|1459
1S72|1|0|G|1460
*
1S72|1|0|C|1483
1S72|1|0|G|1484
1S72|1|0|A|1485
1S72|1|0|A|1486
1S72|1|0|A|1487
1S72|1|0|U|1488
1S72|1|0|G|1489

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain 1

50S ribosomal protein L37e

Chain 2

50S ribosomal protein L39e

Chain A

50S ribosomal protein L2P