IL_1S72_059

3D structure

PDB id

1S72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

GAGCAAC*GGC

Length

10 nucleotides

Bulged bases

1S72|1|0|G|1730

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_39212.2

Basepair signature

cWW-L-L-L-tHS-cWW

Number of instances in this motif group

8

Unit IDs

1S72|1|0|G|1728
1S72|1|0|A|1729
1S72|1|0|G|1730
1S72|1|0|C|1731
1S72|1|0|A|1732
1S72|1|0|A|1733
1S72|1|0|C|1734
*
1S72|1|0|G|2045
1S72|1|0|G|2046
1S72|1|0|C|2047

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain B

50S ribosomal protein L3P

Chain R

50S ribosomal protein L22P

Chain X

50S ribosomal protein L31e