IL_1S72_063

3D structure

PDB id

1S72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

CGUACC*GAAGAAG

Length

13 nucleotides

Bulged bases

1S72|1|0|G|1777

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_72158.7

Basepair signature

cWW-tSH-tSH-tHH-tHS-cWW

Number of instances in this motif group

9

Unit IDs

1S72|1|0|C|1764
1S72|1|0|G|1765
1S72|1|0|U|1766
1S72|1|0|A|1767
1S72|1|0|C|1768
1S72|1|0|C|1769
*
1S72|1|0|G|1774
1S72|1|0|A|1775
1S72|1|0|A|1776
1S72|1|0|G|1777
1S72|1|0|A|1778
1S72|1|0|A|1779
1S72|1|0|G|1780

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain P

50S ribosomal protein L19E

Chain Z

50S ribosomal protein L37Ae